Loading dmp-backend/Dockerfile +2 −2 Original line number Diff line number Diff line Loading @@ -19,5 +19,5 @@ RUN mvn package FROM openjdk:8-jre-alpine WORKDIR /app COPY --from=MAVEN_BUILD /build/web/target/web-1.0-SNAPSHOT.jar /app/app.jar ENTRYPOINT ["java","-Djava.security.egd=file:/dev/./urandom" ,"-Dspring.profiles.active=${PROFILE}","-jar","/app/app.jar"] No newline at end of file COPY --from=MAVEN_BUILD /build/web/target/web-1.0-SNAPSHOT.jar /app.jar ENTRYPOINT ["java","-Djava.security.egd=file:/dev/./urandom" ,"-Dspring.profiles.active=${PROFILE}","-jar","/app.jar"] No newline at end of file dmp-backend/web/src/main/resources/config/application.properties +1 −1 Original line number Diff line number Diff line Loading @@ -90,7 +90,7 @@ notification.finalised.subject=[OpenDMP] The {name} has been finalised notification.modifiedFinalised.subject=[OpenDMP] The {name} has been modified and finalised #############LOGGING######### logging.config=file:/app/logging/logback-${spring.profiles.active}.xml logging.config=file:logging/logback-${spring.profiles.active}.xml #############TEMP######### temp.temp=tmp/ No newline at end of file dmp-db-scema/createDB/createdb.bat +2 −2 Original line number Diff line number Diff line Loading @@ -3,6 +3,6 @@ setlocal cd .. for /F "tokens=*" %%p in ('type Docker\dmp-db.env') do SET %%p psql -d postgres -U postgres -w --set=POSTGRES_USER=%POSTGRES_USER% --set=POSTGRES_PASSWORD=%POSTGRES_PASSWORD% --set=POSTGRES_DB=%POSTGRES_DB% -f main/createDatabase.sql psql -d dmptool -U dmptool -w -f main/DataManagementPlanDB.sql for /R "updates" %%f in (*.sql) do psql --set=ADMIN_USERNAME=%ADMIN_USERNAME% --set=ADMIN_PASSWORD=%ADMIN_PASSWORD% -d dmptool -U dmptool -w -f %%f psql -d %POSTGRES_DB% -U %POSTGRES_USER% --set=POSTGRES_USER=%POSTGRES_USER% -w -f main/DataManagementPlanDB.sql for /R "updates" %%f in (*.sql) do psql --set=ADMIN_USERNAME=%ADMIN_USERNAME% --set=ADMIN_PASSWORD=%ADMIN_PASSWORD% --set=POSTGRES_USER=%POSTGRES_USER% -d %POSTGRES_DB% -U %POSTGRES_USER% -w -f %%f endlocal No newline at end of file dmp-db-scema/initdb.sh +2 −2 Original line number Diff line number Diff line psql -d dmptool -U dmptool -f main/DataManagementPlanDB.sql; psql -d $POSTGRES_DB -U $POSTGRES_USER --set=POSTGRES_USER="$POSTGRES_USER" -f main/DataManagementPlanDB.sql; for j in $(ls updates); do for i in $(ls updates/$j/*.sql); do echo $i psql --set=ADMIN_USERNAME="$ADMIN_USERNAME" --set=ADMIN_PASSWORD="$ADMIN_PASSWORD" -d dmptool -U dmptool -f $i; psql --set=ADMIN_USERNAME="$ADMIN_USERNAME" --set=ADMIN_PASSWORD="$ADMIN_PASSWORD" --set=POSTGRES_USER="$POSTGRES_USER" -d $POSTGRES_DB -U $POSTGRES_USER -f $i; done done No newline at end of file dmp-db-scema/main/DataManagementPlanDB.sql +20 −20 Original line number Diff line number Diff line Loading @@ -59,7 +59,7 @@ CREATE TABLE "DMP" ( ); ALTER TABLE "DMP" OWNER TO dmptool; ALTER TABLE "DMP" OWNER TO :POSTGRES_USER; COMMENT ON COLUMN "DMP"."ProfileData" IS 'More data about the DMP as defined by the profile'; Loading @@ -73,7 +73,7 @@ CREATE TABLE "DMPOrganisation" ( ); ALTER TABLE "DMPOrganisation" OWNER TO dmptool; ALTER TABLE "DMPOrganisation" OWNER TO :POSTGRES_USER; COMMENT ON TABLE "DMPOrganisation" IS 'Linking of DMPs to Organisations'; Loading @@ -92,7 +92,7 @@ CREATE TABLE "DMPProfile" ( ); ALTER TABLE "DMPProfile" OWNER TO dmptool; ALTER TABLE "DMPProfile" OWNER TO :POSTGRES_USER; CREATE TABLE "DMPResearcher" ( Loading @@ -103,7 +103,7 @@ CREATE TABLE "DMPResearcher" ( ); ALTER TABLE "DMPResearcher" OWNER TO dmptool; ALTER TABLE "DMPResearcher" OWNER TO :POSTGRES_USER; COMMENT ON TABLE "DMPResearcher" IS 'Linking of DMPs to researchers'; Loading @@ -126,7 +126,7 @@ CREATE TABLE "Dataset" ( ); ALTER TABLE "Dataset" OWNER TO dmptool; ALTER TABLE "Dataset" OWNER TO :POSTGRES_USER; COMMENT ON COLUMN "Dataset"."Uri" IS 'URI of item'; Loading @@ -151,7 +151,7 @@ CREATE TABLE "DatasetProfile" ( ALTER TABLE "DatasetProfile" ADD CONSTRAINT datasetprofile_unique_ruleset UNIQUE ("Ruleset"); ALTER TABLE "DatasetProfile" ADD CONSTRAINT datasetprofile_unique_viewstyle UNIQUE ("Viewstyle"); ALTER TABLE "DatasetProfile" OWNER TO dmptool; ALTER TABLE "DatasetProfile" OWNER TO :POSTGRES_USER; COMMENT ON TABLE "DatasetProfile" IS 'Profiles for dmp datasets'; Loading @@ -163,7 +163,7 @@ CREATE TABLE "DatasetProfileRuleset" ( "Definition" xml NOT NULL ); ALTER TABLE "DatasetProfileRuleset" OWNER TO dmptool; ALTER TABLE "DatasetProfileRuleset" OWNER TO :POSTGRES_USER; COMMENT ON TABLE "DatasetProfileRuleset" IS 'Sets of Rules for dmp dataset profiles'; Loading @@ -174,7 +174,7 @@ CREATE TABLE "DatasetProfileViewstyle" ( "Definition" xml NOT NULL ); ALTER TABLE "DatasetProfileViewstyle" OWNER TO dmptool; ALTER TABLE "DatasetProfileViewstyle" OWNER TO :POSTGRES_USER; COMMENT ON TABLE "DatasetProfileViewstyle" IS 'Style sets for dmp dataset profiles'; Loading @@ -192,7 +192,7 @@ CREATE TABLE "Organisation" ( ); ALTER TABLE "Organisation" OWNER TO dmptool; ALTER TABLE "Organisation" OWNER TO :POSTGRES_USER; COMMENT ON TABLE "Organisation" IS 'Table of organizations utilized in the project'; Loading Loading @@ -227,7 +227,7 @@ CREATE TABLE "Project" ( ); ALTER TABLE "Project" OWNER TO dmptool; ALTER TABLE "Project" OWNER TO :POSTGRES_USER; COMMENT ON TABLE "Project" IS 'Table of project managed in the system'; Loading Loading @@ -268,7 +268,7 @@ CREATE TABLE "Researcher" ( ); ALTER TABLE "Researcher" OWNER TO dmptool; ALTER TABLE "Researcher" OWNER TO :POSTGRES_USER; Loading Loading @@ -391,7 +391,7 @@ CREATE TABLE "Service" ( "Definition" xml ); ALTER TABLE "Service" OWNER TO dmptool; ALTER TABLE "Service" OWNER TO :POSTGRES_USER; ALTER TABLE ONLY "Service" ADD CONSTRAINT "PKey_Service" PRIMARY KEY ("ID"); Loading @@ -409,7 +409,7 @@ CREATE TABLE "DataRepository" ( "Definition" xml ); ALTER TABLE "DataRepository" OWNER TO dmptool; ALTER TABLE "DataRepository" OWNER TO :POSTGRES_USER; ALTER TABLE ONLY "DataRepository" ADD CONSTRAINT "PKey_DataRepository" PRIMARY KEY ("ID"); Loading @@ -428,7 +428,7 @@ CREATE TABLE "Registry" ( "Definition" xml ); ALTER TABLE "Registry" OWNER TO dmptool; ALTER TABLE "Registry" OWNER TO :POSTGRES_USER; ALTER TABLE ONLY "Registry" ADD CONSTRAINT "PKey_Registry" PRIMARY KEY ("ID"); Loading @@ -442,7 +442,7 @@ CREATE TABLE "DatasetService" ( "ID" uuid DEFAULT uuid_generate_v4() NOT NULL ); ALTER TABLE "DatasetService" OWNER TO dmptool; ALTER TABLE "DatasetService" OWNER TO :POSTGRES_USER; COMMENT ON TABLE "DatasetService" IS 'Linking Dataset to Service'; Loading @@ -454,7 +454,7 @@ CREATE TABLE "DatasetRegistry" ( "ID" uuid DEFAULT uuid_generate_v4() NOT NULL ); ALTER TABLE "DatasetRegistry" OWNER TO dmptool; ALTER TABLE "DatasetRegistry" OWNER TO :POSTGRES_USER; COMMENT ON TABLE "DatasetRegistry" IS 'Linking Dataset to Registry'; Loading @@ -467,7 +467,7 @@ CREATE TABLE "DatasetDataRepository" ( ); ALTER TABLE "DatasetDataRepository" OWNER TO dmptool; ALTER TABLE "DatasetDataRepository" OWNER TO :POSTGRES_USER; COMMENT ON TABLE "DatasetDataRepository" IS 'Linking Dataset to DataRepository'; Loading Loading @@ -543,9 +543,9 @@ ALTER TABLE "Project" ADD CONSTRAINT fk_project_creator FOREIGN KEY ("CreationUs ALTER TABLE "UserInfo" OWNER TO dmptool; ALTER TABLE "UserAuth" OWNER TO dmptool; ALTER TABLE "UserDMP" OWNER TO dmptool; ALTER TABLE "UserInfo" OWNER TO :POSTGRES_USER; ALTER TABLE "UserAuth" OWNER TO :POSTGRES_USER; ALTER TABLE "UserDMP" OWNER TO :POSTGRES_USER; Loading Loading
dmp-backend/Dockerfile +2 −2 Original line number Diff line number Diff line Loading @@ -19,5 +19,5 @@ RUN mvn package FROM openjdk:8-jre-alpine WORKDIR /app COPY --from=MAVEN_BUILD /build/web/target/web-1.0-SNAPSHOT.jar /app/app.jar ENTRYPOINT ["java","-Djava.security.egd=file:/dev/./urandom" ,"-Dspring.profiles.active=${PROFILE}","-jar","/app/app.jar"] No newline at end of file COPY --from=MAVEN_BUILD /build/web/target/web-1.0-SNAPSHOT.jar /app.jar ENTRYPOINT ["java","-Djava.security.egd=file:/dev/./urandom" ,"-Dspring.profiles.active=${PROFILE}","-jar","/app.jar"] No newline at end of file
dmp-backend/web/src/main/resources/config/application.properties +1 −1 Original line number Diff line number Diff line Loading @@ -90,7 +90,7 @@ notification.finalised.subject=[OpenDMP] The {name} has been finalised notification.modifiedFinalised.subject=[OpenDMP] The {name} has been modified and finalised #############LOGGING######### logging.config=file:/app/logging/logback-${spring.profiles.active}.xml logging.config=file:logging/logback-${spring.profiles.active}.xml #############TEMP######### temp.temp=tmp/ No newline at end of file
dmp-db-scema/createDB/createdb.bat +2 −2 Original line number Diff line number Diff line Loading @@ -3,6 +3,6 @@ setlocal cd .. for /F "tokens=*" %%p in ('type Docker\dmp-db.env') do SET %%p psql -d postgres -U postgres -w --set=POSTGRES_USER=%POSTGRES_USER% --set=POSTGRES_PASSWORD=%POSTGRES_PASSWORD% --set=POSTGRES_DB=%POSTGRES_DB% -f main/createDatabase.sql psql -d dmptool -U dmptool -w -f main/DataManagementPlanDB.sql for /R "updates" %%f in (*.sql) do psql --set=ADMIN_USERNAME=%ADMIN_USERNAME% --set=ADMIN_PASSWORD=%ADMIN_PASSWORD% -d dmptool -U dmptool -w -f %%f psql -d %POSTGRES_DB% -U %POSTGRES_USER% --set=POSTGRES_USER=%POSTGRES_USER% -w -f main/DataManagementPlanDB.sql for /R "updates" %%f in (*.sql) do psql --set=ADMIN_USERNAME=%ADMIN_USERNAME% --set=ADMIN_PASSWORD=%ADMIN_PASSWORD% --set=POSTGRES_USER=%POSTGRES_USER% -d %POSTGRES_DB% -U %POSTGRES_USER% -w -f %%f endlocal No newline at end of file
dmp-db-scema/initdb.sh +2 −2 Original line number Diff line number Diff line psql -d dmptool -U dmptool -f main/DataManagementPlanDB.sql; psql -d $POSTGRES_DB -U $POSTGRES_USER --set=POSTGRES_USER="$POSTGRES_USER" -f main/DataManagementPlanDB.sql; for j in $(ls updates); do for i in $(ls updates/$j/*.sql); do echo $i psql --set=ADMIN_USERNAME="$ADMIN_USERNAME" --set=ADMIN_PASSWORD="$ADMIN_PASSWORD" -d dmptool -U dmptool -f $i; psql --set=ADMIN_USERNAME="$ADMIN_USERNAME" --set=ADMIN_PASSWORD="$ADMIN_PASSWORD" --set=POSTGRES_USER="$POSTGRES_USER" -d $POSTGRES_DB -U $POSTGRES_USER -f $i; done done No newline at end of file
dmp-db-scema/main/DataManagementPlanDB.sql +20 −20 Original line number Diff line number Diff line Loading @@ -59,7 +59,7 @@ CREATE TABLE "DMP" ( ); ALTER TABLE "DMP" OWNER TO dmptool; ALTER TABLE "DMP" OWNER TO :POSTGRES_USER; COMMENT ON COLUMN "DMP"."ProfileData" IS 'More data about the DMP as defined by the profile'; Loading @@ -73,7 +73,7 @@ CREATE TABLE "DMPOrganisation" ( ); ALTER TABLE "DMPOrganisation" OWNER TO dmptool; ALTER TABLE "DMPOrganisation" OWNER TO :POSTGRES_USER; COMMENT ON TABLE "DMPOrganisation" IS 'Linking of DMPs to Organisations'; Loading @@ -92,7 +92,7 @@ CREATE TABLE "DMPProfile" ( ); ALTER TABLE "DMPProfile" OWNER TO dmptool; ALTER TABLE "DMPProfile" OWNER TO :POSTGRES_USER; CREATE TABLE "DMPResearcher" ( Loading @@ -103,7 +103,7 @@ CREATE TABLE "DMPResearcher" ( ); ALTER TABLE "DMPResearcher" OWNER TO dmptool; ALTER TABLE "DMPResearcher" OWNER TO :POSTGRES_USER; COMMENT ON TABLE "DMPResearcher" IS 'Linking of DMPs to researchers'; Loading @@ -126,7 +126,7 @@ CREATE TABLE "Dataset" ( ); ALTER TABLE "Dataset" OWNER TO dmptool; ALTER TABLE "Dataset" OWNER TO :POSTGRES_USER; COMMENT ON COLUMN "Dataset"."Uri" IS 'URI of item'; Loading @@ -151,7 +151,7 @@ CREATE TABLE "DatasetProfile" ( ALTER TABLE "DatasetProfile" ADD CONSTRAINT datasetprofile_unique_ruleset UNIQUE ("Ruleset"); ALTER TABLE "DatasetProfile" ADD CONSTRAINT datasetprofile_unique_viewstyle UNIQUE ("Viewstyle"); ALTER TABLE "DatasetProfile" OWNER TO dmptool; ALTER TABLE "DatasetProfile" OWNER TO :POSTGRES_USER; COMMENT ON TABLE "DatasetProfile" IS 'Profiles for dmp datasets'; Loading @@ -163,7 +163,7 @@ CREATE TABLE "DatasetProfileRuleset" ( "Definition" xml NOT NULL ); ALTER TABLE "DatasetProfileRuleset" OWNER TO dmptool; ALTER TABLE "DatasetProfileRuleset" OWNER TO :POSTGRES_USER; COMMENT ON TABLE "DatasetProfileRuleset" IS 'Sets of Rules for dmp dataset profiles'; Loading @@ -174,7 +174,7 @@ CREATE TABLE "DatasetProfileViewstyle" ( "Definition" xml NOT NULL ); ALTER TABLE "DatasetProfileViewstyle" OWNER TO dmptool; ALTER TABLE "DatasetProfileViewstyle" OWNER TO :POSTGRES_USER; COMMENT ON TABLE "DatasetProfileViewstyle" IS 'Style sets for dmp dataset profiles'; Loading @@ -192,7 +192,7 @@ CREATE TABLE "Organisation" ( ); ALTER TABLE "Organisation" OWNER TO dmptool; ALTER TABLE "Organisation" OWNER TO :POSTGRES_USER; COMMENT ON TABLE "Organisation" IS 'Table of organizations utilized in the project'; Loading Loading @@ -227,7 +227,7 @@ CREATE TABLE "Project" ( ); ALTER TABLE "Project" OWNER TO dmptool; ALTER TABLE "Project" OWNER TO :POSTGRES_USER; COMMENT ON TABLE "Project" IS 'Table of project managed in the system'; Loading Loading @@ -268,7 +268,7 @@ CREATE TABLE "Researcher" ( ); ALTER TABLE "Researcher" OWNER TO dmptool; ALTER TABLE "Researcher" OWNER TO :POSTGRES_USER; Loading Loading @@ -391,7 +391,7 @@ CREATE TABLE "Service" ( "Definition" xml ); ALTER TABLE "Service" OWNER TO dmptool; ALTER TABLE "Service" OWNER TO :POSTGRES_USER; ALTER TABLE ONLY "Service" ADD CONSTRAINT "PKey_Service" PRIMARY KEY ("ID"); Loading @@ -409,7 +409,7 @@ CREATE TABLE "DataRepository" ( "Definition" xml ); ALTER TABLE "DataRepository" OWNER TO dmptool; ALTER TABLE "DataRepository" OWNER TO :POSTGRES_USER; ALTER TABLE ONLY "DataRepository" ADD CONSTRAINT "PKey_DataRepository" PRIMARY KEY ("ID"); Loading @@ -428,7 +428,7 @@ CREATE TABLE "Registry" ( "Definition" xml ); ALTER TABLE "Registry" OWNER TO dmptool; ALTER TABLE "Registry" OWNER TO :POSTGRES_USER; ALTER TABLE ONLY "Registry" ADD CONSTRAINT "PKey_Registry" PRIMARY KEY ("ID"); Loading @@ -442,7 +442,7 @@ CREATE TABLE "DatasetService" ( "ID" uuid DEFAULT uuid_generate_v4() NOT NULL ); ALTER TABLE "DatasetService" OWNER TO dmptool; ALTER TABLE "DatasetService" OWNER TO :POSTGRES_USER; COMMENT ON TABLE "DatasetService" IS 'Linking Dataset to Service'; Loading @@ -454,7 +454,7 @@ CREATE TABLE "DatasetRegistry" ( "ID" uuid DEFAULT uuid_generate_v4() NOT NULL ); ALTER TABLE "DatasetRegistry" OWNER TO dmptool; ALTER TABLE "DatasetRegistry" OWNER TO :POSTGRES_USER; COMMENT ON TABLE "DatasetRegistry" IS 'Linking Dataset to Registry'; Loading @@ -467,7 +467,7 @@ CREATE TABLE "DatasetDataRepository" ( ); ALTER TABLE "DatasetDataRepository" OWNER TO dmptool; ALTER TABLE "DatasetDataRepository" OWNER TO :POSTGRES_USER; COMMENT ON TABLE "DatasetDataRepository" IS 'Linking Dataset to DataRepository'; Loading Loading @@ -543,9 +543,9 @@ ALTER TABLE "Project" ADD CONSTRAINT fk_project_creator FOREIGN KEY ("CreationUs ALTER TABLE "UserInfo" OWNER TO dmptool; ALTER TABLE "UserAuth" OWNER TO dmptool; ALTER TABLE "UserDMP" OWNER TO dmptool; ALTER TABLE "UserInfo" OWNER TO :POSTGRES_USER; ALTER TABLE "UserAuth" OWNER TO :POSTGRES_USER; ALTER TABLE "UserDMP" OWNER TO :POSTGRES_USER; Loading